Testing Hypotheses of Language Replacement in the Caucasus with Genetic Evidence Ivan Nasidze and Mark Stoneking Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany email: nasidze@eva.mpg.de The Caucasus is a region of extraordinary diversity; the language diversity in the region equals or exceeds that of the rest of Europe, with three or four linguistic families (Turkic, Indo-European and Caucasian; the last one is sometimes split into two independent families) and several dozen languages are present in the region. We analyzed eleven bi-allelic Y-chromosome markers and sequenced the first hypervariable segment of the mtDNA control region in different populations from the Caucasus and neighboring populations, representing all major linguistic groups in the region. Analysis of these two genetic systems showed that the genetic relationships among Caucasus populations primarily reflect geographic rather than linguistic relationships; in particular, the Indo-European speaking Armenians and Turkic-speaking Azerbaijanians are most closely related to their nearest geographic neighbors in the Caucasus, not their linguistic neighbors (i.e., other Indo-European/Turkic populations). The mtDNA and Y-chromosome evidence thus suggests that the Armenian and Azerbaijanian languages represent instances of language replacement, possibly via elite dominance, that had little impact on the mtDNA and Y chromosome gene pools. Moreover, the genetic distance based on mtDNA between pairs of populations is significantly correlated with geographic distance, which not only emphasizes the lack of correlation between genetic and linguistic relationships, but also indicates that the Caucasus Mountains have not been a significant barrier to gene flow.